PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1004530.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 134aa    MW: 15601 Da    PI: 10.0459
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1004530.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB137.15e-431821697
              NF-YB 16 imkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                       +mkk l +nakiskdaketvqecvsefisf t+eas kc+rekrktingddllwa++tlGf++yveplk+y++k+re++gek
  Pd.00g1004530.m01  1 MMKKGLTGNAKISKDAKETVQECVSEFISFTTGEASGKCRREKRKTINGDDLLWAMTTLGFKEYVEPLKIYFHKFREMKGEK 82
                       69*****************************************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 134 aa     Download sequence    
MMKKGLTGNA KISKDAKETV QECVSEFISF TTGEASGKCR REKRKTINGD DLLWAMTTLG  60
FKEYVEPLKI YFHKFREMKG EKTAGKGMAR QLLYADHHPH GYHDQRQREQ LQHLHAPGMN  120
MYVDPLVYKA WRPR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.11e-47NF-YB family protein