PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1005300.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 461aa MW: 52128.7 Da PI: 10.1412

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1005300.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.1	4.2e-10	1	54	36	95
EEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 36 ltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 ++lede+g++++ + +k+ + l++GW++F+ +++L++gD +vF+l++ +f ++ Pd.00g1005300.m01 1 MVLEDEDGNEYDAVY--IGKRAG--LSGGWRGFALEHKLDDGDALVFELTEPARF--KIY 54 689**********..555544..9********************9765555..444 PP

Sequence ? help Back to Top
Protein Sequence Length: 461 aa Download sequence
MVLEDEDGNE YDAVYIGKRA GLSGGWRGFA LEHKLDDGDA LVFELTEPAR FKIYIVKAYP 60 MPSLECFKNN VDKEEITSAE KTSKAAMKTD SESNQKRRSK RGIVLEMDEP QTSPDSEPNQ 120 KRRSKRGTVP AMVDTKTSPD SESIQKRRSE RGVVPVMEDS KTSPVLEPNQ RRRSKRGMVP 180 EMEDTKTFPD SEPNQKRRSK RGTVPAMVDT KTSPDSESIQ KRRSERGVVP VMEDSKTSTV 240 LEPNQRRRSK RGMVPEMEDT KTFPDSEPNQ KRRSKRGTVP AMVDTKTSPD SESIQKRRSE 300 RGVVPVMEDS KTSPVLEPNQ RRRSKRGMVP VMDDTKTSPD SESNQKQRSK RGIVPEMDDT 360 KTSPKALPDS PKGQEIEQEV SPMKKNEVAP KQIRKKAKAN RVRSTENPEG CEVQEASTGS 420 LEGCEVKQEA STTETDSRIV EDEKKCVARK PRKERLFRKR A

Sequence ? help Back to Top

Protein Sequence Length: 461 aa Download sequence

MVLEDEDGNE YDAVYIGKRA GLSGGWRGFA LEHKLDDGDA LVFELTEPAR FKIYIVKAYP  60
MPSLECFKNN VDKEEITSAE KTSKAAMKTD SESNQKRRSK RGIVLEMDEP QTSPDSEPNQ  120
KRRSKRGTVP AMVDTKTSPD SESIQKRRSE RGVVPVMEDS KTSPVLEPNQ RRRSKRGMVP  180
EMEDTKTFPD SEPNQKRRSK RGTVPAMVDT KTSPDSESIQ KRRSERGVVP VMEDSKTSTV  240
LEPNQRRRSK RGMVPEMEDT KTFPDSEPNQ KRRSKRGTVP AMVDTKTSPD SESIQKRRSE  300
RGVVPVMEDS KTSPVLEPNQ RRRSKRGMVP VMDDTKTSPD SESNQKQRSK RGIVPEMDDT  360
KTSPKALPDS PKGQEIEQEV SPMKKNEVAP KQIRKKAKAN RVRSTENPEG CEVQEASTGS  420
LEGCEVKQEA STTETDSRIV EDEKKCVARK PRKERLFRKR A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	4e-22	B3 family protein