PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1007340.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 168aa    MW: 18724.4 Da    PI: 8.9712
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1007340.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.80.0003589102114
                        EEETTTTEEESSHH CS
            zf-C2H2   1 ykCpdCgksFsrks 14 
                        ++C+dCgk+F+  s
  Pd.00g1007340.m01  89 HVCQDCGKVFKFAS 102
                        79********9877 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MREVSDFNGP VSGGRPPVKL HQVNLNHVLL GIDILKKYLF DNVEHWIPHK ELQNARGFDL  60
NGPVPGGRPP GKLHQASLNN ANVGGQKQHV CQDCGKVFKF ASKPRKHDNS HVKLNSLEAF  120
CSEPGCMKYF SNEQCLKAQS CHQHITCAIC VMWDQGAEKK HRTASLHA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72050.13e-26C2H2 family protein