PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1007540.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 171aa    MW: 18066.3 Da    PI: 8.7407
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1007540.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.63.8e-10140169130
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIart 30 
                        +g+W++eEd +l ++v ++G ++W++Iar 
  Pd.00g1007540.m01 140 KGPWSPEEDAILSRLVSKFGARNWSLIARG 169
                        79**************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 171 aa     Download sequence    
MGIIQKGGEA AQGLGEGGRG WGSGLDDQSG LEDPSGAAGD GTNGQGMMGL GKILLEMVGR  60
YGLFERELGM GQMDREWGGK DSCSGGGCVY GSWGLWVWLR KVAGWVVVGR KREERRAVAT  120
QAVAGGGGES HRKSGRDRVK GPWSPEEDAI LSRLVSKFGA RNWSLIARGI D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.17e-12MYB family protein