PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1008120.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 271aa    MW: 30053.1 Da    PI: 6.8256
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1008120.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.000196183123
                       EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                       y+C+ C + F++   L  H+++H
  Pd.00g1008120.m01 61 YSCSFCRREFRSAQALGGHMNVH 83
                       99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MEQARYWMWA KRKHNSLSSS QHDHLQVPIS NPSNDDSWEE QAFAEDAAGP LGGCIWPPRS  60
YSCSFCRREF RSAQALGGHM NVHRRDRARL KQSPNDETTL QNHHHLDDHS VQNHNPFSSS  120
SLGSFQYPSH QVCALVYNPN NPSSDPGATI ASSSPSSEKI SGAVESGCRA KGDHHVTSTT  180
DLHNLSVSLN LVVRCARPSV SGEEDEAIIS CKRRRTEDVP SSTPFFLKSG SVDKVHHLQA  240
EGFELSCTSS IEDLDLELRL GDRPKVIKVD K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37740.17e-27C2H2 family protein