PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1010080.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 113aa    MW: 12234.7 Da    PI: 10.3425
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1010080.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.33.6e-184287147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                       +g+W++eEd +l ++v ++G ++W++Iar +  gR++k+c++rw + 
  Pd.00g1010080.m01 42 KGPWSPEEDAILSRLVSKFGARNWSLIARGID-GRSGKSCRLRWCNQ 87
                       79******************************.***********985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    
MEREMEAAYA AAAAEVDAEK TTQAVVGGGG ESHRKSGRDR VKGPWSPEED AILSRLVSKF  60
GARNWSLIAR GIDGRSGKSC RLRWCNQLDP SVKRKPFTGG RENKVGSKNS GTD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G55730.16e-31MYB family protein