PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1012470.m02

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 920aa MW: 101126 Da PI: 7.1773

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1012470.m02	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.8	8.6e-18	371	470	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k l+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ Pd.00g1012470.m02 371 FEKMLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-P 460 89************************555567778***********99899999999.*******************876.7 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 e++l +++++ Pd.00g1012470.m02 461 EGKLIMGFRK 470 7777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 920 aa Download sequence
MSSVSQFCGL HPSVFSQTVR CPFSFTPRSG SGFGVSCELE NLSAKVEPRT CMNAACGTSS 60 SIEWKKGWAL RSGGFANLCL KCWSAYEQSI FCDIFHSKES GWRECILCGK RLHCGCIASM 120 FLLDLLDGGG VKCIKCAKSS EPQPILSDEK PDGLGISKIS ELQPTAQDNQ LDGTNVEKLK 180 LIQLGNNKDC NGFRNLLQLQ NNDANGLLQK MKHADTPPPV GEIGGTCLSN FNLASNGSSE 240 APKAEVFKAN LGINDIYDSL PQTNLSMSLG APLGKANPVP AAMFDEREHS KTSSPLLPGA 300 RSRNLFPKPP KLALGAGLEE NSTIASHTRV ARPPAEGRGR NQLLPRYWPR ITDQELQQIS 360 GDSNSTIVPL FEKMLSASDA GRIGRLVLPK ACAEAYFPPI SQPEGLPLRI QDVKGKEWVF 420 QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP EGKLIMGFRK ASNSVAMQDT 480 HLTAIHNGAH SSETFFSGVF ENLPVISGYP GLLQSLKGSM DPHLNALSKH LTTASGDISW 540 HKSEKQEGRT REGMLLPSLL VPERKRTRNI GSKSKRLLID SQDALELKLT WEEAQDLLRP 600 PPAAKPSTIM IEDLEFEEYE EPPVFGKRSI FVVRSTGEHE QWAQCDSCSK WRRLPVDVLL 660 PSKWTCADNA WDQSRRSCSA PDELAPRELE SFLRMSKEFK KRRTVADNRP TQEHESSGLD 720 ALANAAILGD NAADPGTASV ATTTKHPRHR PGCSCIVCIQ PPSGKGKHKP NCTCNVCNTV 780 KRRFKTLMIN KKKRQSEREA EIAYRNQHAW GHRDEAEVDS TSRHVSSHVD PSDNEARSAN 840 ESDSKSQSKV AETGKGILDL NCHPGREGEL QAGPNHATSS TSHVPPQATN ESEDQHNENQ 900 CQEQESGGEE RPDQGQDDPL

Sequence ? help Back to Top

Protein Sequence Length: 920 aa Download sequence

MSSVSQFCGL HPSVFSQTVR CPFSFTPRSG SGFGVSCELE NLSAKVEPRT CMNAACGTSS  60
SIEWKKGWAL RSGGFANLCL KCWSAYEQSI FCDIFHSKES GWRECILCGK RLHCGCIASM  120
FLLDLLDGGG VKCIKCAKSS EPQPILSDEK PDGLGISKIS ELQPTAQDNQ LDGTNVEKLK  180
LIQLGNNKDC NGFRNLLQLQ NNDANGLLQK MKHADTPPPV GEIGGTCLSN FNLASNGSSE  240
APKAEVFKAN LGINDIYDSL PQTNLSMSLG APLGKANPVP AAMFDEREHS KTSSPLLPGA  300
RSRNLFPKPP KLALGAGLEE NSTIASHTRV ARPPAEGRGR NQLLPRYWPR ITDQELQQIS  360
GDSNSTIVPL FEKMLSASDA GRIGRLVLPK ACAEAYFPPI SQPEGLPLRI QDVKGKEWVF  420
QFRFWPNNNS RMYVLEGVTP CIQSMQLQAG DTVTFSRMDP EGKLIMGFRK ASNSVAMQDT  480
HLTAIHNGAH SSETFFSGVF ENLPVISGYP GLLQSLKGSM DPHLNALSKH LTTASGDISW  540
HKSEKQEGRT REGMLLPSLL VPERKRTRNI GSKSKRLLID SQDALELKLT WEEAQDLLRP  600
PPAAKPSTIM IEDLEFEEYE EPPVFGKRSI FVVRSTGEHE QWAQCDSCSK WRRLPVDVLL  660
PSKWTCADNA WDQSRRSCSA PDELAPRELE SFLRMSKEFK KRRTVADNRP TQEHESSGLD  720
ALANAAILGD NAADPGTASV ATTTKHPRHR PGCSCIVCIQ PPSGKGKHKP NCTCNVCNTV  780
KRRFKTLMIN KKKRQSEREA EIAYRNQHAW GHRDEAEVDS TSRHVSSHVD PSDNEARSAN  840
ESDSKSQSKV AETGKGILDL NCHPGREGEL QAGPNHATSS TSHVPPQATN ESEDQHNENQ  900
CQEQESGGEE RPDQGQDDPL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein