PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1012630.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 250aa    MW: 28431.3 Da    PI: 4.5242
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1012630.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY35.22.5e-11104138234
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 
                        dDg+ WrKYGqK + +s+++r Y + +    +C++
  Pd.00g1012630.m01 104 DDGHGWRKYGQKRILNSKHSRDYLKASELllDCTS 138
                        8************************9987778876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
MEWSWPESVL SNGERVKEEL MQGRELAESD EEIVSGDQIQ GISGGGGSAD SSSWDANHTA  60
AVIKSEDFYE ESCKSTSTFK DGRGSYKRRK TSHCWTRDTP ALTDDGHGWR KYGQKRILNS  120
KHSRDYLKAS ELLLDCTSPR ESSNLIRFGD TKQDHPFFSF FTSVKKEELV FKEELIIKEE  180
IPPTSDDRVI TSHDNHSWLC DYLVSPDLTM FESSGPLNGF SSTLDEFDHE DVISRLMMGS  240
FDLDEVLQYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56400.16e-08WRKY family protein