PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1012640.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 230aa MW: 25765.5 Da PI: 7.1982

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1012640.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	39.1	1.5e-12	108	142	2	34
--SS-EEEEEEE--TT-SS-EEEEEE-ST..T--- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa..gCpv 34 dDg++WrKYGqK ++++++pr Y + + +C + Pd.00g1012640.m01 108 DDGHAWRKYGQKAIHNAKHPRDYLKASELilDCAS 142 8************************9987778865 PP

Sequence ? help Back to Top
Protein Sequence Length: 230 aa Download sequence
MELSWPESVL SNRERVMEEL IQGRELASQL RREADGEIVS GDQIQGNSSG GGSADSSSWD 60 ANHAIIKSED FHEEISCKSA STLKDRRGSY KRRKTTHSWT RDTPALTDDG HAWRKYGQKA 120 IHNAKHPRDY LKASELILDC ASPRESSSFI RFGDIKQDHP FFSSFTSVKK EVVIKEEKPQ 180 PSDDHMMASH HHNHSSSGDY KVSPHPTAFK SSCPLSGLSS TIDPYRVLAI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56400.1	1e-09	WRKY family protein