PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1015610.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NF-YB
Protein Properties Length: 146aa    MW: 16187.1 Da    PI: 4.6653
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1015610.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB134.92.5e-42383282
              NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyvep 82
                        eqd +lPianv+rimk++lP++akisk+ak+ +qec++ef+sfvt+easdkc++e+rkt+ngdd++wal+ lGf++y+++
  Pd.00g1015610.m01  3 DEQDGLLPIANVGRIMKQILPQRAKISKEAKQRMQECATEFLSFVTAEASDKCHKENRKTVNGDDICWALSALGFDNYAQA 83
                       69****************************************************************************875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 146 aa     Download sequence    
MVDEQDGLLP IANVGRIMKQ ILPQRAKISK EAKQRMQECA TEFLSFVTAE ASDKCHKENR  60
KTVNGDDICW ALSALGFDNY AQATISGQEM NDVGDHRAAS IYMASQQGLQ VGEQTQTPDL  120
EFRMLEKGDG TKPSVDQEHN LLSNNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47810.11e-45NF-YB family protein