PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1016980.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GeBP

Protein Properties

Length: 261aa MW: 30149.3 Da PI: 8.8742

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1016980.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	89.2	5e-28	14	114	3	97
DUF573 3 fqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk....aksgkepsfskehdqki 88 +r+ws+eDe+ lL+ l+d ++g+ ++d+ fye vk +++++ ++ q+veK+rrLKkK+++ v+k ++gke++f+++hd+ + Pd.00g1016980.m01 14 RKRVWSKEDELELLRSLLDDYYSRGQirTTVKDTASFYEEVKPKLKLECNRVQMVEKLRRLKKKYHNVVNKmndmNSTGKEFRFKNPHDKVV 105 58***************9999999877888********************************9998887789********** PP DUF573 89 felskkiWg 97 fels kiW+ Pd.00g1016980.m01 106 FELSDKIWN 114 ******7 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
MMFEAPEENK KRRRKRVWSK EDELELLRSL LDDYYSRGQI RTTVKDTASF YEEVKPKLKL 60 ECNRVQMVEK LRRLKKKYHN VVNKMNDMNS TGKEFRFKNP HDKVVFELSD KIWNVVDSHE 120 DYAPNSKYVS ICNNIKVKKE EDNVGSSSVA DHEQPQMRHA WSHSRLTTTS CGYKYDEAVG 180 DPSYPIPPGL QFDKLPEDWR CPTCGAAQSF FVSKSVEIAG FAQNQQFGLG GNTLTSGQKA 240 VLIFGGLFLF FVLFLSGYFL Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	9	16	NKKRRRKR
2	10	15	KKRRRK
3	10	16	KKRRRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G04930.2	5e-21	GeBP family protein