PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1022730.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 130aa    MW: 14864.7 Da    PI: 8.0635
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1022730.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM67.63.4e-2161221111
                NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk....kvka..eekewyfFskrdkkyatgkrknratk...sgy 82 
                        +p+G+rF P++eel+ +yL ++v+g++ +   v++++d+y + ePw++ +    +  +  +++++y F++ +kk+++g+r  r++    +g+
  Pd.00g1022730.m01   6 VPVGYRFTPSEEELLLHYLLPRVNGNDYPK-GVVPDCDLYGTqEPWEIWRdfhhS--SpdDQEDIYVFTTLKKKTPNGSRFCRTVGaagTGV 94 
                        599************************999.99*******9879****7423322..24355688******************643344999 PP

                NAM  83 WkatgkdkevlskkgelvglkktLvfykg 111
                        Wk   + k++ +  g+++g++k + + + 
  Pd.00g1022730.m01  95 WKGEDSGKKIRA-CGNDIGIRKRFRYMNP 122
                        ***********9.999********99854 PP
Sequence ? help Back to Top
Protein Sequence    Length: 130 aa     Download sequence    
MGGYQVPVGY RFTPSEEELL LHYLLPRVNG NDYPKGVVPD CDLYGTQEPW EIWRDFHHSS  60
PDDQEDIYVF TTLKKKTPNG SRFCRTVGAA GTGVWKGEDS GKKIRACGND IGIRKRFRYM  120
NPGSPHDDRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46770.19e-18NAC family protein