PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1024950.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 259aa    MW: 29053.6 Da    PI: 9.9529
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1024950.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B354.32.5e-1715102196
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        ffkvl        ++l+lp  f+ +++g++++  +  l+ ++g+ W+v l  + + +++++ +GW++F  ++ Lk+g f+vF ++g s+f  
  Pd.00g1024950.m01  15 FFKVL--LGDDFPRQLCLPPAFMVHYNGPSHC--KCALRGPTGKWWTVGL--EEREDGFYFHEGWRRFLTDHSLKVGYFLVFDHQGGSKF-- 98 
                        66666..33444456***********999666..7***************..*******************************9998888.. PP

                        EEEE CS
                 B3  93 vvkv 96 
                         v++
  Pd.00g1024950.m01  99 DVTI 102
                        4444 PP
2B345.91e-141552401399
                        TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE.....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                 B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliy...rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                        + r+ +pk+ a + g++  ++  ++l+d++grsW+vkl+    + ++gr ++t+G     +an++  gD++vF+l++rse    v++fr+
  Pd.00g1024950.m01 155 QYRMNIPKELAVAEGLI--GKERVMLKDPNGRSWNVKLRLdakEHHGGRLLMTQGLVACWQANNISLGDTIVFELVKRSEM--EVHIFRT 240
                        56899******999888..4557***************99776777777*************************9986555..9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MARKPTKPSP KLPSFFKVLL GDDFPRQLCL PPAFMVHYNG PSHCKCALRG PTGKWWTVGL  60
EEREDGFYFH EGWRRFLTDH SLKVGYFLVF DHQGGSKFDV TIYHPMGCDM RRSIGNSVRP  120
GKRPATAAAV EETSTGSIVF RSEHPCFIGI LGKNQYRMNI PKELAVAEGL IGKERVMLKD  180
PNGRSWNVKL RLDAKEHHGG RLLMTQGLVA CWQANNISLG DTIVFELVKR SEMEVHIFRT  240
GAGGNMRSVV LDASSSVKH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G24700.19e-21B3 family protein