PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1024960.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 148aa    MW: 16957 Da    PI: 5.7909
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1024960.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.71.2e-1411673595
                       EEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
                 B3 35 tltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95
                       t tl+ +sg+ W+v l  + +++r+v++kGW++Fvk++ L+   f+vF +dg+s+f   v+
  Pd.00g1024960.m01 11 TCTLRGPSGECWTVGL--ELRGDRFVFRKGWQGFVKDHSLEIANFLVFDYDGKSKF--DVT 67
                       679*************..999999***************************99888..555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
MNYVNGRLPP TCTLRGPSGE CWTVGLELRG DRFVFRKGWQ GFVKDHSLEI ANFLVFDYDG  60
KSKFDVTMYD PIGTEKELEP AEKRRGNRAR VEEEIIELET EEPDEESEED ARISNTRKCK  120
SGKRIATDGG KEKSNAHVVF RSKHPCFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.14e-14B3 family protein