PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1026760.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family M-type_MADS
Protein Properties Length: 116aa    MW: 13258.6 Da    PI: 8.5084
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1026760.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF321.6e-1043652951
                       HHHT-EEEEEEE-TTSEEEEEE- CS
             SRF-TF 29 vLCdaevaviifsstgklyeyss 51
                       vLCda+v+viifs++g+lye+ss
  Pd.00g1026760.m01 43 VLCDAQVSVIIFSQKGRLYEFSS 65
                       9********************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MCCPVLISPS HKVVVLHKFL HFSLLASVRA LQIFEGVSRL GHVLCDAQVS VIIFSQKGRL  60
YEFSSSDMQE TIKRYHKHAK AGQTNKIEVE EYVEVRNSIL EFGLIHLLVV IKQMHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62165.43e-17MIKC_MADS family protein