PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1027060.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 674aa MW: 76535.6 Da PI: 6.1286

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1027060.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	81.5	1.4e-25	77	161	3	88
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHe 88 Yn+YA+ vGF+vrk+ ++sk +g++++r+f+Cskeg+r+++k++ ++ +++r+etrtgC a++ ++++ dgk++vt++e++HnH Pd.00g1027060.m01 77 YNKYARLVGFNVRKDWVNRSKVHGQVVSRKFTCSKEGYRRKDKRD-VNVKKHRKETRTGCLAHMIITRQPDGKYRVTQFEEQHNHG 161 ****************************************999.999**********************************5 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MEREDDDFGS LHEDSMDVGL QATNRLDLNV EQDSRSPKVV YVNGTQSNPP SIGADSKDSV 60 LEVGTEFESD EHAYKSYNKY ARLVGFNVRK DWVNRSKVHG QVVSRKFTCS KEGYRRKDKR 120 DVNVKKHRKE TRTGCLAHMI ITRQPDGKYR VTQFEEQHNH GNVNSSIAQA LPEQHNHDNV 180 NLSIAQALPL QRECTVPEAA DADSVKELGS LSKSALDSMN RGFRNDWLKW MFREREKWAV 240 VYGRNTFFVD RKGSHLVESL FHDLRNYLYS DLDVLDFVKY FERVVDKQRY KEIEANDEMN 300 RCMPRLMGNV ILLKHASDVY TPRAFEVFQR GYEKCLNIVV NQCSENGPLF EYKTNIFGKS 360 REHTVTFNSS DDSVICSCKK FDSVGFLCSH ALKVLDHMNI KVVPSKYILK RWTKDARLGS 420 ARENDVSSIR DNPKLVVASR YKNMCGRIIM LSAKASESEE AFQFAVGQLD EVMEGVEKIL 480 TLKPQDAQAF TSSSTANASD SERAVIFPDG NAIEDQDDNV VKGAKEKETA VFDKGQLTNV 540 NGEFSSTKRI QNVDTSLQNT DSCISSPSLY VSPEGTTANP IMQGLYNFEA NQVVQCMYQQ 600 DNLVMEEQTN PNMYQPLNFF SNQHDSPGHS QLLQEPLING TYQEPVSSTP ELRQAMDLDV 660 QHAHSSSFLL LDRG

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MEREDDDFGS LHEDSMDVGL QATNRLDLNV EQDSRSPKVV YVNGTQSNPP SIGADSKDSV  60
LEVGTEFESD EHAYKSYNKY ARLVGFNVRK DWVNRSKVHG QVVSRKFTCS KEGYRRKDKR  120
DVNVKKHRKE TRTGCLAHMI ITRQPDGKYR VTQFEEQHNH GNVNSSIAQA LPEQHNHDNV  180
NLSIAQALPL QRECTVPEAA DADSVKELGS LSKSALDSMN RGFRNDWLKW MFREREKWAV  240
VYGRNTFFVD RKGSHLVESL FHDLRNYLYS DLDVLDFVKY FERVVDKQRY KEIEANDEMN  300
RCMPRLMGNV ILLKHASDVY TPRAFEVFQR GYEKCLNIVV NQCSENGPLF EYKTNIFGKS  360
REHTVTFNSS DDSVICSCKK FDSVGFLCSH ALKVLDHMNI KVVPSKYILK RWTKDARLGS  420
ARENDVSSIR DNPKLVVASR YKNMCGRIIM LSAKASESEE AFQFAVGQLD EVMEGVEKIL  480
TLKPQDAQAF TSSSTANASD SERAVIFPDG NAIEDQDDNV VKGAKEKETA VFDKGQLTNV  540
NGEFSSTKRI QNVDTSLQNT DSCISSPSLY VSPEGTTANP IMQGLYNFEA NQVVQCMYQQ  600
DNLVMEEQTN PNMYQPLNFF SNQHDSPGHS QLLQEPLING TYQEPVSSTP ELRQAMDLDV  660
QHAHSSSFLL LDRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	1e-27	FAR1 family protein