PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1027100.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family HD-ZIP
Protein Properties Length: 807aa    MW: 87913 Da    PI: 6.4204
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1027100.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.81.2e-20117172156
                        TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
           Homeobox   1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                        ++k +++t++q++eLe++F+++++p++++r eL+++l+L+++qVk+WFqNrR+++k
  Pd.00g1027100.m01 117 KKKYHRHTPSQIQELENFFKECPHPDEKQRLELSRRLSLETKQVKFWFQNRRTQMK 172
                        79999************************************************999 PP
2START174.56.5e-553265472206
                        HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS....SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEE CS
              START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv...dsgealrasgvvdmvlallveellddkeqWdetla....kaetl 82 
                        la +a++elvk+a+a++p+W k s    e++n +e++     +     + +e  r++ +v+ ++  lve+l+d + +W e++     +a+++
  Pd.00g1027100.m01 326 LAMAAMDELVKMAQADSPLWIKTSdggtEILNHEEYRAFSCIGTKpcnFVTEGTRDTCMVIINSLALVETLMDAN-RWAEMFSclvaRASVI 416
                        57799*******************99999999999998776665588889*************************.**************** PP

                        EEECTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEE CS
              START  83 evissg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwv 167
                        +vis g      galq+m aelq+lsplvp R   f+R+++q+++g+w++vdvS+d +q+ +++  +  ++++pSg+++++++n+ skvtw+
  Pd.00g1027100.m01 417 DVISGGmggtrnGALQVMHAELQVLSPLVPvRPLKFLRFCKQHQEGVWAVVDVSIDINQEGSNTNAFLNCRRFPSGCIVQDMPNNCSKVTWI 508
                        ******************************************************************************************** PP

                        E-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
              START 168 ehvdlkgrlphwllrslvksglaegaktwvatlqrqcek 206
                        eh +++++++h l+ +l++sg+ +ga++w+atlqrqce+
  Pd.00g1027100.m01 509 EHSEYDENTVHHLFWQLLRSGMGFGAQRWLATLQRQCEC 547
                        *************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 807 aa     Download sequence    
MSFGGLISGG SGNSGGGGAR VVADIAPHTP YMPSGAIAQP HFLTSPVPNS MRSSSALSLS  60
VKNMDGHSEL GLIAENFDPG IIGRMRDDEY ESRSGSDNFE GASGDDQDAG DEQRPRKKKY  120
HRHTPSQIQE LENFFKECPH PDEKQRLELS RRLSLETKQV KFWFQNRRTQ MKTQLERHEN  180
IILRQENDKL RAENGVMKDA MANPVCNSCG GPAIPGQISF EEHQLRIENA RLKDELNRIC  240
TLANKFLGRP ISSLASPISL PNSTSGLELG IGRNGIGGLS AGGSGLPMGL NLGDGVSSSS  300
PMMPLIKSST GMLGNEPYER SMYIDLAMAA MDELVKMAQA DSPLWIKTSD GGTEILNHEE  360
YRAFSCIGTK PCNFVTEGTR DTCMVIINSL ALVETLMDAN RWAEMFSCLV ARASVIDVIS  420
GGMGGTRNGA LQVMHAELQV LSPLVPVRPL KFLRFCKQHQ EGVWAVVDVS IDINQEGSNT  480
NAFLNCRRFP SGCIVQDMPN NCSKVTWIEH SEYDENTVHH LFWQLLRSGM GFGAQRWLAT  540
LQRQCECLAF LISSTNSIED HTGLGTNGKK SMLKLAQRMI DNFCAGVSAS SVRKWDKLCV  600
NNVSEDLRVM ARKSVDDPGE PAGIVLSGST SVWLPVSRHR LFDFLRDEQL RDQWDVLSKT  660
HKMQLMLRIA KSQGGGNCVS LLRANVVDAN ENTMLMLQES WSDASGSLVV YAPVDPASMS  720
AVMRGGDSAY VALLPSGFAI LPGGPPGYGM VKTEGNGCDD GGCFLTVGFQ ILGSNYPAAK  780
LDVQSINTVN TLVSHTIEKI KSALQVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00730.10.0HD-ZIP family protein