PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1031130.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family C2H2
Protein Properties Length: 262aa    MW: 29346.4 Da    PI: 4.7725
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1031130.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.35.8e-05138160123
                        EEETTTTEEESSHHHHHHHHHHT CS
            zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                        ykCp+C+  F  ++nL  H+  H
  Pd.00g1031130.m01 138 YKCPKCPCEFAFSENLDAHMADH 160
                        9*******************876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
MNFFYESKVH QNMFNKDQWL CSLAAFEVSH NLCYDTSSHN QLKDPTRLST IELTGKNDFP  60
HTPVSLSFPG RNFSYFSWNE PDLYVERTNL SELGSYQPSN PIVNSLAAQL QYNVGSDPSL  120
TNGVSTRRPL HRSKHTPYKC PKCPCEFAFS ENLDAHMADH CRIEAQTNLM ISSDSASRWM  180
NSDSPMVHSQ FTWNLKDLAG TEASSSNSDG ETSNEDVEKE EMACAKAFLL ANNAENEGQP  240
TANLDTEDPV LSITKSIKEV AI