PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g103230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

GRF

Protein Properties

Length: 311aa MW: 34769.6 Da PI: 8.5943

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g103230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.6	5.9e-25	68	112	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrgr+rsrk++e+ Pd.00g103230.m01 68 DPEPGRCRRTDGKKWRCSKDAYPDSKYCERHMHRGRNRSRKPVES 112 79****************************************986 PP
2	QLQ	64.8	2.2e-22	6	42	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 s+FT +Q+q+L++Q+l++Ky++a++PvPp+L+++iqk Pd.00g103230.m01 6 SPFTVSQWQELEHQALIFKYMMAGMPVPPDLVLPIQK 42 89*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence
MTGMRSPFTV SQWQELEHQA LIFKYMMAGM PVPPDLVLPI QKSFESISQR FFHHPTMGYC 60 SFYGKKVDPE PGRCRRTDGK KWRCSKDAYP DSKYCERHMH RGRNRSRKPV ESQTMTQSSS 120 TVTSLTVTAS SSGTGSFQNL PLNAFGNTQG TSSGTNQSHY QIDSIPFGIP NKDYRYLQGL 180 KPEIGEHSFL SDASGSNKGL QMDSPLDSTW PLMPSRVGSF PASKSGDGSI LHHDYPQHSF 240 FNNAFPSESV KQEGQSLRPF FDEWPKGRDS WSGLEDERSN QTSFSTTQLS ISIPMTSSDI 300 SATSSRSPRD S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	4e-46	GRF family protein