PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g103340.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 603aa MW: 68880.2 Da PI: 8.14

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g103340.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	84.4	1.9e-26	65	150	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YAk+vGF + k +s++s+ ++e+++++f C ++g++++++++ ++r++ ++gCka+++vk++ +g+w+v+++++eHnHel p Pd.00g103340.m01 65 FYKAYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGNKQQSDDA----INPRPSPKIGCKASMHVKRRPNGNWYVYSFVKEHNHELLP 150 **************************************999877....9**********************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 603 aa Download sequence
MFMGPMKTFR PFASAFEGEV HGGCRVDLNF PTTLMDSNTL TLTATSTLEP HDAMEFESHE 60 AAYTFYKAYA KSVGFGTAKL SSRRSRASKE FIDAKFSCIR YGNKQQSDDA INPRPSPKIG 120 CKASMHVKRR PNGNWYVYSF VKEHNHELLP AQAHFFRSHR NTDPLNNDVR IRRRKNLAAV 180 SSLFSAYQNV DCLESYLRNQ HDKGRKQQFE KRWWKLLDRF NLREVEWMQS LYEDRTHWVP 240 TFMRDISFAG LSPTSRSESL NSSFDKYIHG ETSLREFMER YRVILEDRYE EEAKSNFDAW 300 HETPELKSPS PFEKQMSLVY THEVFKNFQV EVLGAAACHL KKENEDGTST TYSVKDFEDN 360 QNYVVEWNES KSDIYCSCHS FEYKGYLCRH AIVVLQMSGV FTIPSKYILQ RWTNTAMSRH 420 AIGERLDEVQ SKVRRYNDLC RRAIILGEEG SLSQESYDVA LCAIKEALKQ CASLNNAVEN 480 NAKPNDSAIH GICGVDEENQ CGTASGDKLF GPKVSNANKT PRRAGSGKEV ARNENTASKK 540 GKVPQLEATS VGTQDGFHQM QLPDTRAMQL RNTVPSTMFQ NVASAAQFHN VASTHVHENH 600 LPQ

Sequence ? help Back to Top

Protein Sequence Length: 603 aa Download sequence

MFMGPMKTFR PFASAFEGEV HGGCRVDLNF PTTLMDSNTL TLTATSTLEP HDAMEFESHE  60
AAYTFYKAYA KSVGFGTAKL SSRRSRASKE FIDAKFSCIR YGNKQQSDDA INPRPSPKIG  120
CKASMHVKRR PNGNWYVYSF VKEHNHELLP AQAHFFRSHR NTDPLNNDVR IRRRKNLAAV  180
SSLFSAYQNV DCLESYLRNQ HDKGRKQQFE KRWWKLLDRF NLREVEWMQS LYEDRTHWVP  240
TFMRDISFAG LSPTSRSESL NSSFDKYIHG ETSLREFMER YRVILEDRYE EEAKSNFDAW  300
HETPELKSPS PFEKQMSLVY THEVFKNFQV EVLGAAACHL KKENEDGTST TYSVKDFEDN  360
QNYVVEWNES KSDIYCSCHS FEYKGYLCRH AIVVLQMSGV FTIPSKYILQ RWTNTAMSRH  420
AIGERLDEVQ SKVRRYNDLC RRAIILGEEG SLSQESYDVA LCAIKEALKQ CASLNNAVEN  480
NAKPNDSAIH GICGVDEENQ CGTASGDKLF GPKVSNANKT PRRAGSGKEV ARNENTASKK  540
GKVPQLEATS VGTQDGFHQM QLPDTRAMQL RNTVPSTMFQ NVASAAQFHN VASTHVHENH  600
LPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G76320.1	1e-160	FAR1 family protein