PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g103360.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 394aa MW: 43554.6 Da PI: 7.0684

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g103360.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.3	2e-19	21	68	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+lv+++k++G g+W++ ++ g++R++k+c++rw +yl Pd.00g103360.m01 21 KGPWTPEEDEKLVEYIKRYGHGSWRALPKLAGLNRCGKSCRLRWTNYL 68 79********************************************97 PP
2	Myb_DNA-binding	52.1	1.5e-16	74	119	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++++eE++ +++++++ G++ W++Ia+ ++ gRt++++k++w+++l Pd.00g103360.m01 74 RGNFSQEEEQTIINLHALVGNK-WSAIANNLP-GRTDNEIKNFWNTHL 119 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 394 aa Download sequence
MMGRSASASG WCDEKSSLVK KGPWTPEEDE KLVEYIKRYG HGSWRALPKL AGLNRCGKSC 60 RLRWTNYLRP NIKRGNFSQE EEQTIINLHA LVGNKWSAIA NNLPGRTDNE IKNFWNTHLK 120 KKLLQMGIDP VTHRPITANN SDNIHHLYYL MINHILSSLA PQLLASSSFS GTCGSLANNN 180 LMMNMNPWGI NNNADLMRLH YSDAKIQVLR NILVQQFLSS TSTPNVEAAF NYLLPSAQPS 240 NLISNISGLL KALHDLDHSQ PPRSPPVLVP SSGSGKSDKL LGYDDHAPFF SSTTGSNKIC 300 TNNNNNSRDH SQQLNLGGSS SSYATPTDDH DQLPLLVSSA APSPESSAAN PTVDNSISNT 360 TYSTTFEAWG NPPDPMDHDD EATNHSYWKD IIME

Sequence ? help Back to Top

Protein Sequence Length: 394 aa Download sequence

MMGRSASASG WCDEKSSLVK KGPWTPEEDE KLVEYIKRYG HGSWRALPKL AGLNRCGKSC  60
RLRWTNYLRP NIKRGNFSQE EEQTIINLHA LVGNKWSAIA NNLPGRTDNE IKNFWNTHLK  120
KKLLQMGIDP VTHRPITANN SDNIHHLYYL MINHILSSLA PQLLASSSFS GTCGSLANNN  180
LMMNMNPWGI NNNADLMRLH YSDAKIQVLR NILVQQFLSS TSTPNVEAAF NYLLPSAQPS  240
NLISNISGLL KALHDLDHSQ PPRSPPVLVP SSGSGKSDKL LGYDDHAPFF SSTTGSNKIC  300
TNNNNNSRDH SQQLNLGGSS SSYATPTDDH DQLPLLVSSA APSPESSAAN PTVDNSISNT  360
TYSTTFEAWG NPPDPMDHDD EATNHSYWKD IIME

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G16770.2	4e-74	MYB family protein