PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1035030.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 214aa    MW: 24592 Da    PI: 9.7224
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1035030.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.14e-10105211397
                        EE-..-HHHHTT-EE--HHH.HTT.............---..--SEEEEEE.TTS-EEEEEE..EEETTEEEE-TTHHH.HHHHHT--TT-E CS
                 B3   3 kvltpsdvlksgrlvlpkkfaeeh.............ggkkeesktltled.esgrsWevkliyrkksgryvltkGWke.FvkangLkegDf 79 
                        k+l+ sd ++s+rl +pk+ a++h             +++  ++ ++t++d  +g + +++++++ + ++y+l + W++ Fv+  gLke+D 
  Pd.00g1035030.m01 105 KILKASDLGNSSRLLVPKDAATNHflrylddkfvqrvDSD--KGLEVTVQDcDTGTRHQLTFKFWSSAKSYILNGEWRGmFVQRRGLKEKDE 194
                        8999******************99******9999965444..7779*****8888888888888*************9769**********9 PP

                        EEEEE-SS.SEE..EEEEE CS
                 B3  80 vvFkldgr.sefelvvkvf 97 
                        + ++  ++ s++ ++++++
  Pd.00g1035030.m01 195 IGLY--WDaSRAMFMFSLL 211
                        9999..4546666666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MEDDYETSKM LALTLSLLNT NPELDQVSTA LTLCDPTWNY NTNQSKAEEL DPASHNVPTF  60
PPNPKQEKIS GTNYTNKELV KQKRKLVVLG PRPSPKPRRP WPIRKILKAS DLGNSSRLLV  120
PKDAATNHFL RYLDDKFVQR VDSDKGLEVT VQDCDTGTRH QLTFKFWSSA KSYILNGEWR  180
GMFVQRRGLK EKDEIGLYWD ASRAMFMFSL LQRA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33720.19e-22B3 family protein