PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1039670.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

CPP

Protein Properties

Length: 808aa MW: 88633.4 Da PI: 6.3677

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1039670.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	28.3	3.6e-09	520	545	16	41
TCR 16 kYCeCfaagkkCseeCkCedCkNkee 41 YCeCfaag++C ++C C +C Nk e Pd.00g1039670.m01 520 SYCECFAAGVYCVDSCACVNCYNKPE 545 6**********************975 PP
2	TCR	52.2	1.2e-16	593	631	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkkskClk+YCeCf+a++ Cs+ C+Ce+CkN+ Pd.00g1039670.m01 593 RHKRGCNCKKSKCLKRYCECFQAKVGCSSACRCEGCKNT 631 589***********************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence
MDRTPEANRI AATKSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP 60 VVFTSPHINL PRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEDVQL CSPSGCVDEY 120 LAYPVEVDST CSADLRSQRT NEVPRLLHSG FSPGKESNTK VCDIMFGSPE NEAVVLSDQA 180 EKDLPLSSLE MSQAAINQRD GKKTEELSRF IFEKVRESDV NSCLVSRAQN FGENAAKVNL 240 QRAGCQYDEK NASSQSREDS NERKQRVQKG LVKEGGQNER GIRRHLQFEA AKAYKFTILG 300 NSESPNSLTH DGTNSRSPSI LTNLKSLASS HFDNRASSSL QDVSCDTSQF PSSPYESFTS 360 AQIGVNSTTS APIHSGIGLH LNRISRSTSL SSDIFSSKKS TGYLSTPEQM LEHGSNNIAT 420 NSSSILTSAV SGKIYVYVAS NQQESQAVTE ANSFTFHSTD TMKPPCHSML VDQEAAPCEV 480 GMSASQETDE VEELNQLSPK RKRQVQHYQF CLSLFFIIGS YCECFAAGVY CVDSCACVNC 540 YNKPEFEDTV LDIRQQIEAR NPLAFTPKVV DNAIDSSPNF TEEQDLTTPS SARHKRGCNC 600 KKSKCLKRYC ECFQAKVGCS SACRCEGCKN TFGVTPEPVY NRAKRWEAHP AEKLDNVKGA 660 IACIKAPGII HYSPTWEGIS DISKLTPLSH PCSRTAFSSA SSSNSAKIPQ AQLSSSQLQP 720 SGAHYDIPYD DTPEILEETS NPTKFVKASS PNQKRVSPPQ SRSRLRERSP TGLRSGRKFI 780 LQAMPSFPPL TPHRNSNEGT NEIENDDK

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence

MDRTPEANRI AATKSSSISS SPAVQESPFS NFLSNLSPLN TATTASYTQT LLGTNLPTPP  60
VVFTSPHINL PRETSFLERD DIVEAGSEVY KECNTNIVQI QNPSFEDVQL CSPSGCVDEY  120
LAYPVEVDST CSADLRSQRT NEVPRLLHSG FSPGKESNTK VCDIMFGSPE NEAVVLSDQA  180
EKDLPLSSLE MSQAAINQRD GKKTEELSRF IFEKVRESDV NSCLVSRAQN FGENAAKVNL  240
QRAGCQYDEK NASSQSREDS NERKQRVQKG LVKEGGQNER GIRRHLQFEA AKAYKFTILG  300
NSESPNSLTH DGTNSRSPSI LTNLKSLASS HFDNRASSSL QDVSCDTSQF PSSPYESFTS  360
AQIGVNSTTS APIHSGIGLH LNRISRSTSL SSDIFSSKKS TGYLSTPEQM LEHGSNNIAT  420
NSSSILTSAV SGKIYVYVAS NQQESQAVTE ANSFTFHSTD TMKPPCHSML VDQEAAPCEV  480
GMSASQETDE VEELNQLSPK RKRQVQHYQF CLSLFFIIGS YCECFAAGVY CVDSCACVNC  540
YNKPEFEDTV LDIRQQIEAR NPLAFTPKVV DNAIDSSPNF TEEQDLTTPS SARHKRGCNC  600
KKSKCLKRYC ECFQAKVGCS SACRCEGCKN TFGVTPEPVY NRAKRWEAHP AEKLDNVKGA  660
IACIKAPGII HYSPTWEGIS DISKLTPLSH PCSRTAFSSA SSSNSAKIPQ AQLSSSQLQP  720
SGAHYDIPYD DTPEILEETS NPTKFVKASS PNQKRVSPPQ SRSRLRERSP TGLRSGRKFI  780
LQAMPSFPPL TPHRNSNEGT NEIENDDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-46	CPP family protein