PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g104000.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 465aa MW: 51708.4 Da PI: 4.2593

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g104000.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	55.7	1.7e-17	14	64	1	50
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..k 50 lp GfrF+Ptdeel+++yL+ k++g++ ++ +vi+e+d++k+ePwdLp + Pd.00g104000.m01 14 LPLGFRFRPTDEELIDYYLRSKINGNHKQV-TVIREIDVCKWEPWDLPDlsE 64 699**********************999.99************94232 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MLVVDMAVLS TNTLPLGFRF RPTDEELIDY YLRSKINGNH KQVTVIREID VCKWEPWDLP 60 DLSELDGTNP GQNPFVLCRL FKKQDETIED SNFAEVEPTV SSSTAAISSP QDAQSDHALG 120 PASPSFGRLD EKPTKVECTI ADCSNGMEPD TLQPFECPCN SYNGYDAEDQ LNVPLEELDI 180 FYDPPQQPLF SPLHSQMQTE LYYCGSNNFN NGHQGVKFQH GTNDQDADIS EFLSSIFNSS 240 GEYSDVDAKV AVPCETEFQN SVQSEGNIDR KGPVQNESTR IDCDQSSMFR VTSNHSNVFL 300 TGDAGTGIRL RTRETQNPTS TENFARQGDA PRRIRLQLHC SNLSKDWNCR PEDQETKPMA 360 VEEIRDTEEK AVDAAVCNAV DAATDPPRKE TMSTRPNFTP EGSILTGERV PNVILQASPA 420 GHSMWSFAFL FRVVVVVAFL FIMLLAYGDF ISFDAAGSPF TARMA

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MLVVDMAVLS TNTLPLGFRF RPTDEELIDY YLRSKINGNH KQVTVIREID VCKWEPWDLP  60
DLSELDGTNP GQNPFVLCRL FKKQDETIED SNFAEVEPTV SSSTAAISSP QDAQSDHALG  120
PASPSFGRLD EKPTKVECTI ADCSNGMEPD TLQPFECPCN SYNGYDAEDQ LNVPLEELDI  180
FYDPPQQPLF SPLHSQMQTE LYYCGSNNFN NGHQGVKFQH GTNDQDADIS EFLSSIFNSS  240
GEYSDVDAKV AVPCETEFQN SVQSEGNIDR KGPVQNESTR IDCDQSSMFR VTSNHSNVFL  300
TGDAGTGIRL RTRETQNPTS TENFARQGDA PRRIRLQLHC SNLSKDWNCR PEDQETKPMA  360
VEEIRDTEEK AVDAAVCNAV DAATDPPRKE TMSTRPNFTP EGSILTGERV PNVILQASPA  420
GHSMWSFAFL FRVVVVVAFL FIMLLAYGDF ISFDAAGSPF TARMA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24590.2	4e-24	NAC family protein