PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1040140.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family LBD
Protein Properties Length: 83aa    MW: 9372.51 Da    PI: 7.247
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1040140.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF26074.91.5e-231375163
             DUF260  1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvy 63
                       aCa+Ck +rrkC + C +apyfpa++ ++f+n+hk+FG+sn++k+++ + ++er++a++s++ 
  Pd.00g1040140.m01 13 ACASCKQQRRKCDETCEMAPYFPASRYSEFQNAHKIFGVSNIQKTMAMAAPDERQAAAESILT 75
                       7************************************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 83 aa     Download sequence    
MENRDQVAAQ NHACASCKQQ RRKCDETCEM APYFPASRYS EFQNAHKIFG VSNIQKTMAM  60
AAPDERQAAA ESILTDGREC KEK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13850.12e-20LBD family protein