PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1046390.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 348aa    MW: 38209.9 Da    PI: 8.3079
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1046390.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding42.31.7e-1378122147
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
  Pd.00g1046390.m01  78 RESWTEQEHDKFLEALQLFDRD-WKKIEAFVG-SKTVIQIRSHAQKY 122
                        789*****************77.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MVSVNPNPAQ GFYLFDPMNM GLPGLNSMPP PTATATTASA ATSTTACTAS STPTNATSLL  60
AEDQSKKIRK PYTITKSRES WTEQEHDKFL EALQLFDRDW KKIEAFVGSK TVIQIRSHAQ  120
KYFLKVQKKG TSEHVPPPRP KRKATHPYPQ KAPKTAVVSQ VPGQFQSSSA LLEHGYVYQP  180
DSSFALGTPV TSATLSSWSY NSVPPVNVSQ ITKDDGRLAG PTVAHNSCYS SSNESNPTTW  240
QMSEKVDRAD PGQPHRVLPD FAQVYKFIGS VFDPNATSHL ERLKELDPIN LETVLLLMRN  300
LSLNLASPEF EDHRKLLSSY DADSEKAKSD SNCNFSCIGK SENAILSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01520.11e-100MYB_related family protein