PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1048750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 187aa    MW: 20927.9 Da    PI: 5.1032
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1048750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.65.2e-09148174430
                        HHHHHHHHHHHHHHHHHHHHHCTSCCC CS
                HLH   4 ahnerErrRRdriNsafeeLrellPka 30 
                         hn+ Er+RR++i+ ++  L++l+P++
  Pd.00g1048750.m01 148 LHNMSERKRRKKIRGKLGALQQLIPNC 174
                        5*************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MTHQVPDWTA TEEGDSSKSF QYEEFGPLPD SVVPHHHPHP QTETETDHDY SLWNINTSGA  60
SGATGAAEDH NHRCFQEIFE DLSNIPLEPT ITPNAIFASD KHFVCDFDKG ESSSGLKTTS  120
RFMETKSVSG EIKQKQDDRP KRTLAAELHN MSERKRRKKI RGKLGALQQL IPNCNTGDDD  180
SVDYAAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G20180.17e-07bHLH family protein