PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g104970.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 186aa    MW: 20784 Da    PI: 9.8713
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g104970.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM37.76.2e-129110194
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkk........leleevikevdiykveP.w.dLpkkvkaeekewyfFskrdkkyatgkrknratksgy. 82 
                       lp+G+rF+P+   l+ +yL ++v++          l+  +++ e+d+y  e  w +L    +++e+++yfF++ +kk+ +g+r +r+   g  
  Pd.00g104970.m01   9 LPVGCRFEPSKTKLLAHYLYNRVAHYLynkvnglpLSS-NTVIECDLYGKEEtWrKLF--DETGETSLYFFTELKKKTMRGSRVERTSLGGCv 98 
                       799*************9999998887754555532333.3588999997754141443..34578899******************8776655 PP

               NAM  83 .Wkatgkdkevls 94 
                        Wk++  dk+++ 
  Pd.00g104970.m01  99 tWKNQS-DKAIYG 110
                       5*9874.577776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
METTRGLGLP VGCRFEPSKT KLLAHYLYNR VAHYLYNKVN GLPLSSNTVI ECDLYGKEET  60
WRKLFDETGE TSLYFFTELK KKTMRGSRVE RTSLGGCVTW KNQSDKAIYG NDGPPNKTLI  120
GFGVLVDINV SYLNSAYSGE EVEVKAKALR VGKAVGVASV ELRKKKTCKI IAQGYHTKYL  180
ALTSKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.11e-08NAC family protein