PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1053060.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 186aa    MW: 20913.1 Da    PI: 10.0595
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1053060.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-091567655
                       HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-..STCHHHHHHHHHHHHHHH CS
                HLH  6 nerErrRRdriNsafeeLrellPk.askapskK..lsKaeiLekAveYIksLq 55
                       + +Er+RR +++   ++L +l+P+  sk+++ K  ls    L +A  YIk+L+
  Pd.00g1053060.m01 15 KTVERNRRIHMKGLCFKLASLVPPqHSKPSNSKdtLSQQKQLDLASSYIKQLR 67
                       679*********************77755555556****************95 PP
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    
MKKCSGESSS KLDRKTVERN RRIHMKGLCF KLASLVPPQH SKPSNSKDTL SQQKQLDLAS  60
SYIKQLRERI ENLKERKEKA MRSQLGIDAN STIDADNAMI VRSRLPVIEL KDSGSIIEVV  120
LISGLNKNFM LYEVIGILQE EGAEVVSASF STIGDKVFHS LHAQVKISRV GVETSTVWQR  180
LQDLVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.12e-31bHLH family protein