PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1054310.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 312aa    MW: 34809.1 Da    PI: 7.1241
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1054310.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.6e-171461148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       rg WT+ Ed +l+ +v ++G g+W++++++ g++R++k+c++rw +yl
  Pd.00g1054310.m01 14 RGIWTAAEDAKLLAYVSKHGVGNWTLVPKKAGLNRCGKSCRLRWTNYL 61
                       788*******************************************97 PP
2Myb_DNA-binding461.2e-1470110446
                        S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
    Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                        +T++E+e ++++++  G++ W+ Ia+ ++ gRt++++k++w++
  Pd.00g1054310.m01  70 FTPQEEEHIINLHEAIGSR-WSHIAKLLP-GRTDNDVKNYWNT 110
                        8******************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    
MGRPPCCDKS NVKRGIWTAA EDAKLLAYVS KHGVGNWTLV PKKAGLNRCG KSCRLRWTNY  60
LRPDLKHDIF TPQEEEHIIN LHEAIGSRWS HIAKLLPGRT DNDVKNYWNT KLKKKLSKMG  120
IDPVTHKPFS QILSDYGNIS SLPSINNQFG FFFKNSNNTF VPKSEPSSGI TGLPLGVNTY  180
SNMMMNPIGS DNSTASTLSL GIVAQFQEIN QDCVQVQPHF LNEVASSCSS SSSPHATDHQ  240
LSSQPTYLCQ QSLHEAQITP SSSFNWSEFL LHDPFSSADK LKQEQDFHGT ILVQDSEMQA  300
AFPELLDASF DY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G28470.12e-80MYB family protein