PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1056110.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

FAR1

Protein Properties

Length: 245aa MW: 27460.7 Da PI: 6.2551

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1056110.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	97.9	1.1e-30	76	170	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk.....tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnH 87 +fYn+YAk++GFs+r+++ ++sk++++i++r+f+Cskeg+r+e++ k + k+rr ra tr gCka ++v++++ g+w+v+kle++HnH Pd.00g1056110.m01 76 NFYNAYAKQTGFSIRVNSYYRSKKDNSIISREFCCSKEGFRRERHAKkdsgeDAKRRRARALTREGCKALMTVRRRDCGRWYVAKLEKNHNH 167 6****************************************999989999899999******************************** PP FAR1 88 ela 90 el+ Pd.00g1056110.m01 168 ELV 170 *97 PP

Sequence ? help Back to Top
Protein Sequence Length: 245 aa Download sequence
MEVVPSSECE AKGVDSFVAL GDEGYEHSVA EEVEAPVVLD DGKEGYVDFD LSQYIGGGVV 60 EPTLGMEFTS EDDARNFYNA YAKQTGFSIR VNSYYRSKKD NSIISREFCC SKEGFRRERH 120 AKKDSGEDAK RRRARALTRE GCKALMTVRR RDCGRWYVAK LEKNHNHELV TPAMRHFLRS 180 HKQDFAPEKS CSNSFSSPGL SLDAPVDVLT DCSSFGKMEF AMRPNPPSVG SSQLGLRQCL 240 DDNQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-31	FAR1 family protein