PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1057240.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB_related
Protein Properties Length: 95aa    MW: 11467.9 Da    PI: 8.0472
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1057240.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding32.52e-102968445
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
    Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                       +T++E++ll +  ++ G++ W++Ia +++ gRt++++  +w 
  Pd.00g1057240.m01 29 MTEQEEDLLCRMYRLVGPR-WDLIAGRIP-GRTPEELERYWI 68
                       7****************99.*********.***********5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 95 aa     Download sequence    
MDRCRRKRPK TATSESDEVI SNEWEFINMT EQEEDLLCRM YRLVGPRWDL IAGRIPGRTP  60
EELERYWIMR HSDTFADKRN QQTKDNSKKC WSSNV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.11e-39MYB_related family protein