PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1063660.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MIKC_MADS

Protein Properties

Length: 207aa MW: 23682 Da PI: 7.1315

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1063660.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	30.8	3.8e-10	27	49	29	51
HHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 29 vLCdaevaviifsstgklyeyss 51 vLCda+v+viifs++g+lye+ss Pd.00g1063660.m01 27 VLCDAQVSVIIFSQKGRLYEFSS 49 9********************96 PP
2	K-box	73.9	4.5e-25	70	161	8	98
K-box 8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 + e+ e+l++e++ + k+ienL+ +qR+llG +L+s+ ++eLq++ +qLe+s++kiR++K +l+ eq+e+l+ ke+ l een +L++++ Pd.00g1063660.m01 70 KiEVEEYVEQLKHESTAMAKKIENLEASQRKLLGHGLDSCPVEELQEITDQLERSVRKIRERKAHLFAEQMEQLRAKERLLLEENAKLSEEF 161 3356777899******************************************************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 207 aa Download sequence
MKKVRLATQA SVRALQIFEG VSRLGHVLCD AQVSVIIFSQ KGRLYEFSSS DMQETIKRYH 60 KHAKAGQTNK IEVEEYVEQL KHESTAMAKK IENLEASQRK LLGHGLDSCP VEELQEITDQ 120 LERSVRKIRE RKAHLFAEQM EQLRAKERLL LEENAKLSEE FGAQPRLLLQ QQQLSVEEKG 180 AVSYWSQSSL SSEVETELFI GPPVTRC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62165.3	2e-56	MIKC_MADS family protein