PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1063820.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family ERF
Protein Properties Length: 174aa    MW: 18486.6 Da    PI: 5.7976
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1063820.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.93.8e-163281155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                       + y+G+r  +++g+Wv+eIr+p++   ++r++lg++  +e+Aa+a++ a+ +l+g
  Pd.00g1063820.m01 32 PVYRGIR--SRSGKWVSEIREPRK---TTRIWLGTYAKPEMAAAAYDVAAIALKG 81
                       68****6..678*********843...5***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 174 aa     Download sequence    
MADPYPHDRD CSSSPRPGPS GASTSSLPRG HPVYRGIRSR SGKWVSEIRE PRKTTRIWLG  60
TYAKPEMAAA AYDVAAIALK GPDTALNFPN SILTYPIPAS SAASDIRAAA ARAAQSRAEM  120
ISAGESGERS EPEALLNMPN LLVDMAEGML VSPPRISSED SPGNSDGGEN LWSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52020.19e-36ERF family protein