PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1065050.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 194aa    MW: 20789.4 Da    PI: 10.463
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1065050.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY100.51e-3149107259
                        --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                         D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers+ dp+++++tY+g+Hnh+
  Pd.00g1065050.m01  49 ADLWAWRKYGQKPIKGSPHPRNYYRCSSSkGCSARKQVERSTADPNIFVVTYTGDHNHP 107
                        699************************998****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 194 aa     Download sequence    
MRPRAMVPAL PPPLPREPFT MPINSPRPRK RKCQQKRQVC QVSAENLSAD LWAWRKYGQK  60
PIKGSPHPRN YYRCSSSKGC SARKQVERST ADPNIFVVTY TGDHNHPRPT HRNSLAGSTR  120
NKLSATAGQN QPINNDPAMP DEIFLGLKQL GCTSSSGSGG SLAAGASGET FSDQEPSSLG  180
SSWAAAGATV GGGC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.12e-48WRKY family protein