PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1067500.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

C2H2

Protein Properties

Length: 330aa MW: 37300.8 Da PI: 8.9505

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1067500.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.9	3.6e-05	64	86	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k + +s++k H++t+ Pd.00g1067500.m01 64 WVCDKCSKGYAVQSDYKAHLKTC 86 58*******************98 PP
2	zf-C2H2	11.4	0.00097	94	112	5	23
TTTEEESSHHHHHHHHHHT CS zf-C2H2 5 dCgksFsrksnLkrHirtH 23 dCg++Fsr +++ H+ t+ Pd.00g1067500.m01 94 DCGRVFSRVESFIEHQDTC 112 9***************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MHRRRHKVPW KLLKREIAQD QVIKKRVFVC PEPSCLHHDP CHALGDLVGI KKHFRRKHSN 60 HKQWVCDKCS KGYAVQSDYK AHLKTCGTRG HSCDCGRVFS RVESFIEHQD TCTVRHVVRP 120 EFQAALQPAC SSRTASSTSP SSDTNFSINN NNNNNVPQVL PGFPLRPNPT HHHDHQRDHA 180 LNNPHSSCNQ QQQQQVHNNI LELQLLPSSN THTTSPPNLD EKHATHLKLS IGSSSCDQRG 240 DEKNDQTSQP SSSGVRRSSS NAEKMDGAGL TLEVARLKEF ASEELKLAMA EKAYAEDARR 300 EAKRQIEMAE LEFTNAKRMR QQALAELEKA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01940.2	5e-90	C2H2 family protein