PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1069620.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

WRKY

Protein Properties

Length: 579aa MW: 63565.2 Da PI: 7.0059

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1069620.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.4	2e-30	275	333	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt + Cpv+k+v+r+a+d +++++tYeg+Hnh+ Pd.00g1069620.m01 275 MNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPCPVRKQVQRCADDMSILITTYEGSHNHP 333 58********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 579 aa Download sequence
MPKRRSKAME NNNTEENSFL GNTPVEDKTK KSDGHDEEGT SMEMEISKGG HGWLAEPEQT 60 NTLMPSSSAG KDRALIKHPQ EDELQSAKAE MGEVKEENER LKLLLSRIVR NYQSLQIHFH 120 GRLQKDEEAK KSMDPSSSAR DQSNEQDEEA DELVSLSLGR SSSTDQPRKD EQMKKTSHFS 180 KNGKGDDEEG LNGAGLALEL GCRFEPAADQ STEVVMKNSS SDNSCGDPKE DDSTKLWPPS 240 KTSKTTRSGD DEVSQQTHLK KARVSVRARC DAPTMNDGCQ WRKYGQKIAK GNPCPRAYYR 300 CTVSPCPVRK QVQRCADDMS ILITTYEGSH NHPLPMSATA MASTTSAAAS MLQSYSSTSQ 360 QGHTAMAPIS ASTNLQGLNF SKSTLSQNSR LPQHFYFPNS SISTTNSHPT VTLDHTAPSP 420 SHFGRFPAAV FSSNPRYPST CLNFSSSPSS SLDHNNHTLQ LQAPWNNNHT AAGYLNYGNR 480 LMLTETIASA TKAITSNPKF QSALAAALTS FVDANSPIPS PPFQPNLQPT FPTPSEPSQP 540 SYATSLSCWG ARDGEWMVSH VADWGRLIRE GQRRNREGL

Sequence ? help Back to Top

Protein Sequence Length: 579 aa Download sequence

MPKRRSKAME NNNTEENSFL GNTPVEDKTK KSDGHDEEGT SMEMEISKGG HGWLAEPEQT  60
NTLMPSSSAG KDRALIKHPQ EDELQSAKAE MGEVKEENER LKLLLSRIVR NYQSLQIHFH  120
GRLQKDEEAK KSMDPSSSAR DQSNEQDEEA DELVSLSLGR SSSTDQPRKD EQMKKTSHFS  180
KNGKGDDEEG LNGAGLALEL GCRFEPAADQ STEVVMKNSS SDNSCGDPKE DDSTKLWPPS  240
KTSKTTRSGD DEVSQQTHLK KARVSVRARC DAPTMNDGCQ WRKYGQKIAK GNPCPRAYYR  300
CTVSPCPVRK QVQRCADDMS ILITTYEGSH NHPLPMSATA MASTTSAAAS MLQSYSSTSQ  360
QGHTAMAPIS ASTNLQGLNF SKSTLSQNSR LPQHFYFPNS SISTTNSHPT VTLDHTAPSP  420
SHFGRFPAAV FSSNPRYPST CLNFSSSPSS SLDHNNHTLQ LQAPWNNNHT AAGYLNYGNR  480
LMLTETIASA TKAITSNPKF QSALAAALTS FVDANSPIPS PPFQPNLQPT FPTPSEPSQP  540
SYATSLSCWG ARDGEWMVSH VADWGRLIRE GQRRNREGL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15130.1	2e-69	WRKY family protein