PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1070230.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

NAC

Protein Properties

Length: 711aa MW: 81601.5 Da PI: 7.1145

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1070230.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	62.1	1.7e-19	5	77	55	127
NAM 55 ekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyr 127 +++ +fFs+ +y+++k+++r+t+ g+Wk+tg+++e+ ++ +++++g k++L+fy g+a+++ ktdWvmhey Pd.00g1070230.m01 5 DENGFFFSQP--EYTQKKNTKRSTEVGFWKKTGREHEIRTRdrRRTVIGKKRILTFYIGHARNSDKTDWVMHEYY 77 4556888876..5677899******************99767778*************************7 PP
2	NAM	69.4	1e-21	316	390	51	127
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyr 127 +k+++++w+fFs+ + ++++knr+t++g+Wk tg++++++++ +++++g k++L+fy+gr +++e+t+Wvmhey Pd.00g1070230.m01 316 LKSDDENWFFFSRPEY---NKHKKNRTTQEGFWKITGREHAIKARdNRSVIGRKRILTFYRGRVRNSERTNWVMHEYY 390 4568899**99876...4579****************9967778*************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 711 aa Download sequence
MKPDDENGFF FSQPEYTQKK NTKRSTEVGF WKKTGREHEI RTRDRRRTVI GKKRILTFYI 60 GHARNSDKTD WVMHEYYIPN AHPNANQRDF VLCHLKKNVK KSDEIHTDVA TTCDEGEPST 120 HNASDFEHPL AHDILEEYVD YIALQPAFAA NDSDVEFAEF LETVLVEPDG GVTSDTDMEP 180 FLGHVQAEML SEGFYGSSQP SRDTGGIFRN QISPQAASSV NVAPKPQTDR VQLNSDTSQG 240 AHGPRHQPGP IIDTSADEYY TKEKTRRRTN PPAKPKQPAY RRTAADLPQK QISPTNSSQD 300 KKVAQGKNAE KESSLLKSDD ENWFFFSRPE YNKHKKNRTT QEGFWKITGR EHAIKARDNR 360 SVIGRKRILT FYRGRVRNSE RTNWVMHEYY IPDDNPNAQR DFVLCRLKKN VKRSDENTDV 420 AATCDEGETH NASDVENQPV NDMNMEDTWP PENLDYFERA RDLLLANSPS NNDHNAFQPA 480 FSAHDEEANF DDFLRTLIVE PQFGVTSDTG REPVHHRVQS LQMRCEPQIP YELLQCGSSQ 540 SRRDTDVILH NQLSRQASSS VNVASKPGTY QREHRPQQQS GPIIVFRDTS ADEYYTREKT 600 RRITYPPEKP KEPEKPKPTP EKPKEPPYPR TAADFPQKQI SITKSSIDKK VPQGSMEQTQ 660 NRTPRNWKGS FITWQTSPLT SPPSVYIFNT VLGAILFLFC VREVVLYGEW C

Sequence ? help Back to Top

Protein Sequence Length: 711 aa Download sequence

MKPDDENGFF FSQPEYTQKK NTKRSTEVGF WKKTGREHEI RTRDRRRTVI GKKRILTFYI  60
GHARNSDKTD WVMHEYYIPN AHPNANQRDF VLCHLKKNVK KSDEIHTDVA TTCDEGEPST  120
HNASDFEHPL AHDILEEYVD YIALQPAFAA NDSDVEFAEF LETVLVEPDG GVTSDTDMEP  180
FLGHVQAEML SEGFYGSSQP SRDTGGIFRN QISPQAASSV NVAPKPQTDR VQLNSDTSQG  240
AHGPRHQPGP IIDTSADEYY TKEKTRRRTN PPAKPKQPAY RRTAADLPQK QISPTNSSQD  300
KKVAQGKNAE KESSLLKSDD ENWFFFSRPE YNKHKKNRTT QEGFWKITGR EHAIKARDNR  360
SVIGRKRILT FYRGRVRNSE RTNWVMHEYY IPDDNPNAQR DFVLCRLKKN VKRSDENTDV  420
AATCDEGETH NASDVENQPV NDMNMEDTWP PENLDYFERA RDLLLANSPS NNDHNAFQPA  480
FSAHDEEANF DDFLRTLIVE PQFGVTSDTG REPVHHRVQS LQMRCEPQIP YELLQCGSSQ  540
SRRDTDVILH NQLSRQASSS VNVASKPGTY QREHRPQQQS GPIIVFRDTS ADEYYTREKT  600
RRITYPPEKP KEPEKPKPTP EKPKEPPYPR TAADFPQKQI SITKSSIDKK VPQGSMEQTQ  660
NRTPRNWKGS FITWQTSPLT SPPSVYIFNT VLGAILFLFC VREVVLYGEW C

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35580.1	9e-22	NAC family protein