PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1071260.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 178aa    MW: 19766.3 Da    PI: 10.1949
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1071260.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY1017.1e-32112169359
                        -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        D y+WrKYGqK++kgs++pr+YY+C+s  gCp++k+ver+ e+p+++++tYegeHnh+
  Pd.00g1071260.m01 112 DDYSWRKYGQKPIKGSPHPRGYYKCSSMrGCPARKHVERCLEEPSMLIVTYEGEHNHP 169
                        99***********************9988****************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    
MMYRRSNSGI NLNFDSSSCT PTMSSTRSFI SSLSIDGSVA NFDGNSFHLI GAPLSSDQNS  60
QHKRKCSARG DDGSVKCGSS GRCHCSKKRK HRVKRSIKVP AISNKLADIP PDDYSWRKYG  120
QKPIKGSPHP RGYYKCSSMR GCPARKHVER CLEEPSMLIV TYEGEHNHPR IPSQSTTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G30590.15e-95WRKY family protein