PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g107380.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family FAR1
Protein Properties Length: 245aa    MW: 28512.2 Da    PI: 8.4682
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g107380.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR184.22.1e-2680168290
              FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       fY+eYA++vGF +r+ + ++s+r+g+i  r++ C+keg+  + + k    r++ra+tr gCka+++vk +k++kw++tk+ ++HnH+l+
  Pd.00g107380.m01  80 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRASTREGCKAMIHVKYDKSSKWVITKFIKDHNHPLV 168
                       9**************************************99999998****************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
MHDKDKTKHS HFEAFTSQRN FHSRPENEDL LSLLESMDSD EGARAVESSS SQALVLYEAD  60
SILEPYEGME FESEDAAKIF YDEYARRVGF VMRVMSCRRS ERDGRILARR LGCNKEGHCV  120
SIRGKFGPVR KPRASTREGC KAMIHVKYDK SSKWVITKFI KDHNHPLVVS PREARQTMDE  180
KDKKIQELTA ELRNKKRLCT TYQEQLTAFT KIVEEYSDQL SKKVQNVVSN LKEFESIDRE  240
LSQHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43280.11e-110FAR1 family protein