PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1074470.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

Protein Properties

Length: 581aa MW: 65851.1 Da PI: 9.9294

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1074470.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57	3.6e-18	88	174	1	95
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 f+k +++s+v + +l lp kf+e+h +k ++s +++lede+g++++ + +k+ + l++GW++F+ +++L++gD +vF+l++ +f Pd.00g1074470.m01 88 FVKSMVRSHVYSCFWLGLPSKFCEDHLSK-TGS-EMVLEDEDGNEYDAVY--IGKRAG--LSGGWRGFALEHKLDDGDALVFELTEPARF-- 171 89**********************655.444.9***********..555544..9********************9765555.. PP EEE CS B3 93 vvk 95 ++ Pd.00g1074470.m01 172 KIY 174 444 PP

Sequence ? help Back to Top
Protein Sequence Length: 581 aa Download sequence
MVAAVDSFTA NTYEEARNQR LEENKRKFQV DIGLPTLRKG SRKTSSSWGS YLARPIEEVR 60 AASYEERSAA FKAAEKLQEN LQTENPSFVK SMVRSHVYSC FWLGLPSKFC EDHLSKTGSE 120 MVLEDEDGNE YDAVYIGKRA GLSGGWRGFA LEHKLDDGDA LVFELTEPAR FKIYIVKAYP 180 MPSLECFKNN VDKEEITSAE KTSKAAMKTD SESNQKRRSK RGIVLEMDEP QTSPDSEPNQ 240 KRRSKRGTVP AMVDTKTSPD SESIQKRRSE RGVVPVMEDS KTSPVLEPNQ RRRSKRGMVP 300 EMEDTKTFPD SEPNQKRRSK RGTVPAMVDT KTSPDSESIQ KRRSERGVVP VMEDSKTSTV 360 LEPNQRRRSK RGMVPEMEDT KTFPDSEPNQ KRRSKRGTVP AMVDTKTSPD LESIQKRRSE 420 RGVVPVMEDS KTSPVLEPNQ RRRSKRGMVP VMDDTKTSPD SESNQKQRSK RGIVPEMDDT 480 KTSPKALPDS PKGQEIEQEV SPMKKNEVAP KQIRKKAKAN RVRSTENPEG CEVQEASTES 540 LEGCEVKQEA STTETDSRIV EDEKKCVARK PRKERLFRKR A

Sequence ? help Back to Top

Protein Sequence Length: 581 aa Download sequence

MVAAVDSFTA NTYEEARNQR LEENKRKFQV DIGLPTLRKG SRKTSSSWGS YLARPIEEVR  60
AASYEERSAA FKAAEKLQEN LQTENPSFVK SMVRSHVYSC FWLGLPSKFC EDHLSKTGSE  120
MVLEDEDGNE YDAVYIGKRA GLSGGWRGFA LEHKLDDGDA LVFELTEPAR FKIYIVKAYP  180
MPSLECFKNN VDKEEITSAE KTSKAAMKTD SESNQKRRSK RGIVLEMDEP QTSPDSEPNQ  240
KRRSKRGTVP AMVDTKTSPD SESIQKRRSE RGVVPVMEDS KTSPVLEPNQ RRRSKRGMVP  300
EMEDTKTFPD SEPNQKRRSK RGTVPAMVDT KTSPDSESIQ KRRSERGVVP VMEDSKTSTV  360
LEPNQRRRSK RGMVPEMEDT KTFPDSEPNQ KRRSKRGTVP AMVDTKTSPD LESIQKRRSE  420
RGVVPVMEDS KTSPVLEPNQ RRRSKRGMVP VMDDTKTSPD SESNQKQRSK RGIVPEMDDT  480
KTSPKALPDS PKGQEIEQEV SPMKKNEVAP KQIRKKAKAN RVRSTENPEG CEVQEASTES  540
LEGCEVKQEA STTETDSRIV EDEKKCVARK PRKERLFRKR A

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58280.1	8e-60	B3 family protein