PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1075250.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family B3
Protein Properties Length: 98aa    MW: 11521.3 Da    PI: 9.398
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1075250.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B349.57.6e-162193986
                       HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                 B3  9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86
                       d ++++ l++p  f+++++g      + t++ ++g+ W v+l  ++++++ ++ kGW +Fvk++ +++ Df++F +dg
  Pd.00g1075250.m01 21 DDFSQH-LRIPPAFIKNFNGRR--LGKCTMRGPTGKCWAVEL--EQRRDGLFFHKGWPGFVKDHFIESEDFLIFDYDG 93
                       556666.********8887774..348***************..*******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    
MDKKLKCPLE RPSFRAFLVG DDFSQHLRIP PAFIKNFNGR RLGKCTMRGP TGKCWAVELE  60
QRRDGLFFHK GWPGFVKDHF IESEDFLIFD YDGGWLRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.13e-12B3 family protein