PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1077840.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 736aa    MW: 82467.1 Da    PI: 5.2472
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1077840.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS384.71.1e-1173617311373
               GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilk 92 
                        l++lL+ cA+avs++d + a++lL+++++++sp gd  qRla++f+++L+arla++++++y al++++ts    ++ l+a++ +  ++P+ k
  Pd.00g1077840.m01 361 LRTLLILCAQAVSADDRRTANELLKQIRQHSSPFGDGSQRLAHCFANGLEARLAGTGTQIYTALSSKRTS---AADMLKAYQNYIAACPFTK 449
                        5789************************************************************999999...9****************** PP

               GRAS  93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlv 182
                        ++ + aN++I + +e++e++HiiDf+i +G+QWpaL++ L+ R++gpp+lRiTg++ p+sg   +e+++etg+rLak++e+ +vpfe+++ +
  Pd.00g1077840.m01 450 VAIIFANHMISKLAEKAETLHIIDFGILYGFQWPALIHCLSIRAGGPPKLRITGIELPQSGfrPEERVQETGHRLAKYCERYNVPFEYTA-I 540
                        ************************************************************9*****************************.7 PP

               GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleak 274
                        ak++e++++eeL+vk++E+laVn+ ++ ++llde+v+++s+rd+vL+l+++++P+++v+   + ++ ++ F++rf eal ++salfd+++++
  Pd.00g1077840.m01 541 AKKWETIQIEELKVKRDEVLAVNCLFRFKNLLDETVAVNSPRDAVLNLIRRMNPDIFVHGIINGSYHAPFFVTRFREALFHFSALFDMFDTN 632
                        ******************************************************************************************** PP

               GRAS 275 lpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrp 366
                        +pre+  r + E+e+lgre+vn +aceg+er+ r et+++W+ r ++aGFk++pl+ + +++ ++ ++  + + + v+e+ +++++gWk+r 
  Pd.00g1077840.m01 633 VPREDPMRLMFEEEFLGREVVNTIACEGSERVVRPETYKQWQVRNMRAGFKQLPLDRELMNKLRMKVKLGYHRDFVVDEDGNWMLQGWKGRI 724
                        ***********************************************************************999****************** PP

               GRAS 367 LvsvSaW 373
                        ++  S+W
  Pd.00g1077840.m01 725 IYCSSCW 731
                        ******* PP
Sequence ? help Back to Top
Protein Sequence    Length: 736 aa     Download sequence    
MDPGFSQLPN SSLSSGDQTL SPNFNEYPSS DPFVDLSFLD QNPSNSALSP SLSPEGDDND  60
YSDSVLKYIN QVLMEEDMVT KPCMFHDPLA VQAAEKSLYE VLGEKYPPSP DQHPLNIESP  120
DCPFSVTFSD FSAINSSSSS NSHSVDSRWS NADVIENKPS ILETPIPDNF VFQSTSKPRS  180
QLSSNGNGNG LVGSYMSELM VSNLFSESEL VLQFNRGVEE ASKFLPRGQF IVDVEKNKPY  240
SVASGKAEDV VVKTEKDDIE LLATSSRGKK SHEREDTDLE DGRSNKQSAV YLEDTEAELS  300
EIFDKVLLCG GGKAEPFVCG GEEVCQDEAN KALQQNGQSV GTGNGKTRAK KKGDKKEVVD  360
LRTLLILCAQ AVSADDRRTA NELLKQIRQH SSPFGDGSQR LAHCFANGLE ARLAGTGTQI  420
YTALSSKRTS AADMLKAYQN YIAACPFTKV AIIFANHMIS KLAEKAETLH IIDFGILYGF  480
QWPALIHCLS IRAGGPPKLR ITGIELPQSG FRPEERVQET GHRLAKYCER YNVPFEYTAI  540
AKKWETIQIE ELKVKRDEVL AVNCLFRFKN LLDETVAVNS PRDAVLNLIR RMNPDIFVHG  600
IINGSYHAPF FVTRFREALF HFSALFDMFD TNVPREDPMR LMFEEEFLGR EVVNTIACEG  660
SERVVRPETY KQWQVRNMRA GFKQLPLDRE LMNKLRMKVK LGYHRDFVVD EDGNWMLQGW  720
KGRIIYCSSC WVPSRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein