PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1077880.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 715aa    MW: 81290.4 Da    PI: 5.81
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1077880.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS393.32.6e-1203427132374
               GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                         +lL++cA+av+s d++ a++lL+++++++sp+gd++qRla+yf+ +L+arla+  +  y+ l + + s    +e l+a+++f+  sP+ ++
  Pd.00g1077880.m01 342 STLLTQCAQAVASYDQRTASELLKQIRQHSSPYGDATQRLAHYFADGLEARLAGARTPSYSPLISMQIS---AAEILKAYEVFVTSSPFRTV 430
                        579***************************************************989999888888887...8******************* PP

               GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlva 183
                        s+++aN++Il+ +e+e+r+H+iDf+is+G+QWp+++q L++Rp+gpp+lRiT+++ p++g   +e++eetg+rL+k+Ae+++vpfe+nv +a
  Pd.00g1077880.m01 431 SNFLANRTILKLAEKETRLHVIDFGISYGFQWPCFIQRLSKRPGGPPKLRITAIEVPQPGfrPTERVEETGRRLKKYAERFNVPFEYNV-IA 521
                        ***********************************************************9****************************9.7* PP

               GRAS 184 krledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleakl 275
                        +++e++++e+L+++++E+++Vn++ +l +++de+v ++s+rd vLkl+k+++P+++++   +  +ns+ F++rf eal ++salfd +ea++
  Pd.00g1077880.m01 522 QKWETIQFEDLKIDRNEVIVVNCMNRLRHIPDETVMVNSPRDIVLKLIKEINPDLFIHGVVNGTYNSPFFVTRFREALFHFSALFDVFEASV 613
                        ******************************************************************************************** PP

               GRAS 276 preseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrp 366
                        pre+e r + E+++ g++i nvvaceg er+er et+++W+ r  +aGFk++pl++++ k++k++l+ ++  + +r++ee +++++gWk+r+
  Pd.00g1077880.m01 614 PREDERRLMFEKAVYGKDILNVVACEGLERVERPETYKQWQVRNVRAGFKQLPLDQEILKKVKRMLKFMGyHNDFRIDEEGHWILQGWKGRT 705
                        *******************************************************************9999999****************** PP

               GRAS 367 LvsvSaWr 374
                        ++++S+W+
  Pd.00g1077880.m01 706 IMALSFWK 713
                        *******8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 715 aa     Download sequence    
MDTLPERYSL SLERFNFGHG SASFYSNQNL VNGFQVNQES TGPICLSTNL DHSSDSNTFL  60
SSGSDGDTTD INDYNCPVIK YISDILLEED LEGKPCMLQD CLALQAAEKS FYDVLNQKDP  120
LSPKQPPLSV HQSFENSDDD SPRSCHSSNT SIAAKTNWVF DPSETSHVQS SLVQSLPDAA  180
LDSDSLSEMQ RLEYFGGLRE ASKFLPNVKF ETIDLKGCQL MPPGLDQWPP AANTLMRRPD  240
NDDYSSTNRS KGKKNHQRDD GDYPEEGRSN KQPVAFADDS EPQEMFDEVL LCLGNFEFES  300
CSNDESLTTE GSGKLQHNKQ SKGSKTAGSK KQNNNRELVD LSTLLTQCAQ AVASYDQRTA  360
SELLKQIRQH SSPYGDATQR LAHYFADGLE ARLAGARTPS YSPLISMQIS AAEILKAYEV  420
FVTSSPFRTV SNFLANRTIL KLAEKETRLH VIDFGISYGF QWPCFIQRLS KRPGGPPKLR  480
ITAIEVPQPG FRPTERVEET GRRLKKYAER FNVPFEYNVI AQKWETIQFE DLKIDRNEVI  540
VVNCMNRLRH IPDETVMVNS PRDIVLKLIK EINPDLFIHG VVNGTYNSPF FVTRFREALF  600
HFSALFDVFE ASVPREDERR LMFEKAVYGK DILNVVACEG LERVERPETY KQWQVRNVRA  660
GFKQLPLDQE ILKKVKRMLK FMGYHNDFRI DEEGHWILQG WKGRTIMALS FWKKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein