PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1077910.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family GRAS
Protein Properties Length: 707aa    MW: 80615.7 Da    PI: 6.693
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1077910.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS383.52.6e-1173357053374
               GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                        +lL++cA+av+s d++ a++lL+++++++sp+gd+ +Rla+yf+ +L+arla++ +  y+ l + +t+    +e l+a++l++  +P+ k+ 
  Pd.00g1077910.m01 335 TLLTQCAQAVASYDQRTASELLKQIRKHSSPYGDAAERLAHYFADGLEARLAGTRTPSYSPLLSIQTP---AAEILKAYQLYVTHCPYKKML 423
                        69***************************************************999999999888888...8******************** PP

               GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                        h+  N++I++ +e+++r+HiiDf+is+G+QWp+++q L++Rp+gpp++R+T+++ p++g   +e++eetg+rL k+A+++ vpf+++v +a+
  Pd.00g1077910.m01 424 HFFSNRTIMKLAEKATRLHIIDFGISYGFQWPCFIQRLSKRPGGPPNIRMTAIELPQPGfrPTERVEETGRRLDKYAKRFSVPFQYKV-IAQ 514
                        **********************************************************9****************************9.7** PP

               GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        ++e++++e+L+++++E ++Vn++++l++++de+v  +s+rd+vLkl+k+++P++ ++   +  +ns+ Fl+rf eal ++sa fd++ea++p
  Pd.00g1077910.m01 515 KWETIQFEDLKIDRDELIVVNCMHRLKHIPDETVMASSPRDTVLKLIKRINPDLYIHGVVNGAYNSPFFLTRFREALFHFSAQFDMFEATIP 606
                        ******************************************************************************************** PP

               GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpL 367
                        re+e+r + E++++g++i+nv+aceg er+er et+++W+ r ++aGFk++pl+++  k++k++l+ ++  + +r++e+ +++++gWk+r +
  Pd.00g1077910.m01 607 REDEQRLMFEKAVFGKDIMNVIACEGLERVERPETYKQWQVRYQRAGFKQLPLDQELLKKVKTMLKVMHyHNDFRIDEDGHWMLQGWKGRII 698
                        ******************************************************************9988999******************* PP

               GRAS 368 vsvSaWr 374
                        + + +W+
  Pd.00g1077910.m01 699 MGLAFWK 705
                        ******7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 707 aa     Download sequence    
MDTLLERLSV SKEKFHFGHG SIPVHSNQNL VNGFQVNHEP ANPPFLPTNS DHPGDSSSSL  60
SSGSDGDTFD ISDCSQPVLK YISDILLEED LEGKPCMLQD CLALQAAEKS FYDVLNQKDP  120
PSPNQPPLSD HQSFENSDDD STHSCHRSND YRAEKTDWVF DSSETSQVQS SLVESPPDTL  180
LASDSLYGNF GGVGEARKLL PNENFGIIDL EKYQLMSQGP NTLFRNLASK RENDGYNSTN  240
RSKEKKNHER EDGDYAEEGR SNKQSAASAD DSEPQEMFDK VLLCSVNHES ESCSHDEPLK  300
NEGSGKLKPN KQSKGSKTAR SKKQNNKREV VDFSTLLTQC AQAVASYDQR TASELLKQIR  360
KHSSPYGDAA ERLAHYFADG LEARLAGTRT PSYSPLLSIQ TPAAEILKAY QLYVTHCPYK  420
KMLHFFSNRT IMKLAEKATR LHIIDFGISY GFQWPCFIQR LSKRPGGPPN IRMTAIELPQ  480
PGFRPTERVE ETGRRLDKYA KRFSVPFQYK VIAQKWETIQ FEDLKIDRDE LIVVNCMHRL  540
KHIPDETVMA SSPRDTVLKL IKRINPDLYI HGVVNGAYNS PFFLTRFREA LFHFSAQFDM  600
FEATIPREDE QRLMFEKAVF GKDIMNVIAC EGLERVERPE TYKQWQVRYQ RAGFKQLPLD  660
QELLKKVKTM LKVMHYHNDF RIDEDGHWML QGWKGRIIMG LAFWKPA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein