PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1086580.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

HD-ZIP

Protein Properties

Length: 170aa MW: 18999.7 Da PI: 8.506

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1086580.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	40.9	3.4e-13	38	67	27	56
HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 27 aeereeLAkklgLterqVkvWFqNrRakek 56 a+++++LA+kl+L rqV vWFqNrRa+ k Pd.00g1086580.m01 38 AKQKQDLARKLNLRPRQVEVWFQNRRARTK 67 6899************************98 PP
2	HD-ZIP_I/II	89.9	3.1e-29	37	100	25	88
HD-ZIP_I/II 25 eperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLr 88 ++K++lar+L+l+prqv+vWFqnrRARtk+kq+E d+e Lk+++++lkeen++L+ke +eL+ Pd.00g1086580.m01 37 VAKQKQDLARKLNLRPRQVEVWFQNRRARTKLKQTEADCELLKKCCETLKEENRKLHKELQELK 100 479************************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 170 aa Download sequence
MSFDEACNTG LGLSLGCRPS TASKIEEAES TDLHQAVAKQ KQDLARKLNL RPRQVEVWFQ 60 NRRARTKLKQ TEADCELLKK CCETLKEENR KLHKELQELK LMKQTATAAA PPFYMQFPTA 120 TLTMCPSCEK ICNGGDHHNH HGSSTSSFLI GSKPAHLIFN PFSTHPSTAC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	62	70	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37790.1	4e-47	HD-ZIP family protein