PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1087510.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 133aa    MW: 15552.5 Da    PI: 8.9131
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1087510.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY101.64.6e-3273131159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                        ldDg++WrKYG+K+vk+s++pr+YY+C+ +gCpvkk+ver+++dp++v++tYeg Hnh 
  Pd.00g1087510.m01  73 LDDGFKWRKYGKKMVKNSPNPRNYYKCSVEGCPVKKRVERDRDDPRFVITTYEGIHNHM 131
                        59********************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 133 aa     Download sequence    
MWYQNQRITP QLTITIDLNC FIKCEANEVD ESRGSSSQLG GSNSRENESG SVRERQEVRE  60
RVAFKTKSEV EILDDGFKWR KYGKKMVKNS PNPRNYYKCS VEGCPVKKRV ERDRDDPRFV  120
ITTYEGIHNH MSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G26170.16e-46WRKY family protein