PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1087750.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family MYB
Protein Properties Length: 279aa    MW: 31651.5 Da    PI: 5.7513
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1087750.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.55.7e-171461148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
    Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                       +g+WT+ Ed++l+d+vk +G g+W + +r+ g++R++k+c++rw++yl
  Pd.00g1087750.m01 14 KGAWTALEDQILIDYVKDHGEGRWGKLSRETGLKRCGKSCRLRWLNYL 61
                       79********************************************97 PP
2Myb_DNA-binding52.31.3e-1667111147
                        TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
    Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w+++
  Pd.00g1087750.m01  67 RGNITEDEEDLIIRLHKLLGNR-WALIAGRLP-GRTDNEIKNYWNSV 111
                        7999******************.*********.***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MGRSYRCDKD GLSKGAWTAL EDQILIDYVK DHGEGRWGKL SRETGLKRCG KSCRLRWLNY  60
LRPEIKRGNI TEDEEDLIIR LHKLLGNRWA LIAGRLPGRT DNEIKNYWNS VLRKKAQESH  120
SERSRNEWKT TKDTEKAVPS LKMDSHFIQN GLTPTSCINN EQLGTTNTLA EPFTSGVEAT  180
NMEVKSDSSD GFLPIAREND MTWNFIRDLN AGELGISEFL HTDFSKLCEL NTTIFDCTSG  240
CRNRSLMSTS TAEAPLNLQE WLNDWAADDN CLPEAAFGP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22640.14e-56MYB family protein