PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Pd.00g1087780.m01

Organism

Prunus domestica

Taxonomic ID

3758

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus

Family

MYB

Protein Properties

Length: 202aa MW: 23629.7 Da PI: 8.6443

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pd.00g1087780.m01	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	61.9	1.4e-19	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd++l+++++ +G+++Wk +a + g++R++k+c++rw +yl Pd.00g1087780.m01 15 RGSWTAEEDQKLAQVIEIHGPKRWKFVATKAGLNRCGKSCRLRWMNYL 62 89********************************************97 PP
2	Myb_DNA-binding	50	6.9e-16	68	113	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + +E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l Pd.00g1087780.m01 68 RGNISDQEEDLILRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 113 78999***************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 202 aa Download sequence
MIPLSRRSTR KEVNRGSWTA EEDQKLAQVI EIHGPKRWKF VATKAGLNRC GKSCRLRWMN 60 YLRPNIKRGN ISDQEEDLIL RLHRLLGNRW SLIAGRLPGR TDNEIKNYWN SHLSKKIKQR 120 ERQNRAVSKA EQESSDTENI QVMEVNALTI GREDASKCEE SFKSGFNGDE FFDCSSDEGP 180 LNLEWMNKFL EMDESWFTLH DI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G40330.1	1e-53	MYB family protein