PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pd.00g1088940.m01
Organism
Prunus domestica
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
Family WRKY
Protein Properties Length: 227aa    MW: 25107.2 Da    PI: 8.6151
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pd.00g1088940.m01genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY91.28.3e-2972131159
                        ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
               WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                        ++Dgy+WrKYGqK+ ++++ pr+YY+C++a +Cpvkkkv++sae+p v++ tYegeHnh 
  Pd.00g1088940.m01  72 VKDGYQWRKYGQKVTRDNPSPRAYYKCSFApSCPVKKKVQKSAENPCVLVATYEGEHNHM 131
                        58***************************99****************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    
MDSEWVNTSL GLNVIPFHPA SDDQAPVKKQ LELEGDYAKV FEGHASVKQE AAASHISRVH  60
VRTEASDTRL IVKDGYQWRK YGQKVTRDNP SPRAYYKCSF APSCPVKKKV QKSAENPCVL  120
VATYEGEHNH MHPETRAEVT LIGSISPNQQ LSPLSPSMPK RTSPVPTFSC DKNNNLSPRE  180
IEGAPPAFQQ FLVQQMASSL TKDPNFASAL AAAISGRFSD HSRMGNW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.11e-53WRKY family protein